Last updated: 2021-08-20

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Knit directory: SCENIC_pipeline/

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Rmd 728c832 lily123920 2021-08-18 diyici
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  1. module:一个转录因子TF和其相应的预测靶基因targets构成一个module。
  2. co-expression module/network:基于表达数据得到的共表达关系,量化指标可以为pearson correlation coefficient
  3. regulon: In cell biology and genetics, a regulon is a collection of genes or operons under regulation by the same regulatory protein.在细胞生物学和遗传学中个,调节子指的是受同一个调控蛋白调控的基因或操纵子的集合。 在该分析中指的是:每个TF及其potential direct targets构成一个regulon(可翻译成调控单元)。
  4. GRN, gene regulatory network 基因调控网络: